Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891476.1_cds_XP_016446264.1_41138
CDS Infomation

[gene=LOC107771419] [db_xref=GeneID:107771419] [protein=C2 domain-containing protein At1g53590-like isoform X2] [protein_id=XP_016446264.1] [location=complement(join(11214..12209,12420..12543,13600..13786,13865..13957,15485..15533,15786..15827,15913..16065,17238..17369,17473..17568,17839..17916))] [gbkey=CDS]
Sequence

ATGGAGGAGATTGTTTCACAGAAAATTCTCCTCCCTATCATTCCATGGTTTATGCAAAAG
TACAAACCCTGGACTGCTAAAGAAGCTGCAATTCAGCACCTCTACTTGGGAAGAAATCCA
CCTATGTTCACAGAAATGAGGGTTCTTCGTGAATCTACTGGAGATGATCACTTGGTCCTG
GAGTTGGGAATGAATTTTCGTACTGCTGATGACATGAGTGCAATTCTTGCCGTGAAACTG
AGAAAAAGGTTGGGCTTTGGGATGTGGGCAAAGTTGCATCTGTTGGGCATGCATGTTGAG
GGAAAGGTCTTGGTTGGGGTAAAGTTCTTAAGGAAGTGGCCGTTTATCAGTCGTTTGCGG
GTGTGCTTTGTGGAGCCTCCTTATTTTCAGATGACTGTGAAGCCAATTTTCACACATGGG
CTTGATGTAACAGAACTTCCTGGAATTGCTGGATGGATGGATAAACTACTTGCTGTTGCC
TTTGAGCAGACACTTGTCGAGCCCAACATGCTGGTGGTGGATGTTGAGAAGTTTGTGTCA
CCACAACCAGAAAACTGGTTCTCGGTTGATGCTAAGGAGCCCATTGCTTTTGTTATTTTA
GAAGTTCTTGAAGCAGCTGACATGAAGCCGTCAGATTTAAATGGATTCGCTGATCCATAT
GTTAAGGGACGCCTTGGCCCCTACAGATTCAGGACTAAAACTCGGAAGAAGACATTGACT
CCACAGTGGAATGAGGAGTTCAAGATTCCAGTCTGTACATGGGAGTCTCCTAACAACATG
CTCAATGTAGAAGTTCGTGACAAGGACCATTTTATTGATGATACATTGGGAGATTGTTCC
ATCAACATCTGCGATTTTAGGGATGGGCAGAGGCGTGATATGTGGTTGTCTCTTCAGAAC
ATTAAAATGGGGAGATTGCATCTTGCCATAACTGTTGTTGACTGTAGCAAAAAGCGCGCG
GAGCAGTCATATGAGCGAGGAAGCGTGGACGATGAACAGGATATCAAATCTGCTGAGATG
GATACAACTGAACAAAGCTCCTTAACCACTGAATCAGCCGATAAATCATCAAAAGCTGGA
GATAAGTATGAACCTATTAATATCGAAGGGCAGCAGGAGACTGGTATATGGGTACACCAC
CCAGGGAGTGAAGTAGCACAAGTCTGGGAACCAAGAAAGGGAAAAAGCAGGGTTGATGGG
GAAGTTCTTGGCGTGAGTGGTGATTCCAAGGGAAGTTTTAAGTCAACTGCAGGGGGCTCC
CCGCACAATGATGAGTGCAGGTCTGATGGAAGTGTTAATGGAAGTAAGCCAGATTCTCCT
AGTCGAATTCACAGGGGTTTACATAAGATCAGCTCGCTTTTCCACAGAAGTCCTAGACAC
GAGGATAAGTCGGGCAATCTCGGAGAACCTGAGACATCTCAACACGAGAATCTTAGGGCA
GTTAGTGCCAAGGAAATTGGAGTGAAGATTATAGTGGATGACACGGTTTCCCTTTCATCA
TTGGTCACAACACCTACAGAAGATGGAAAAGAGAGTCATGAGGGAAATGGGGAACGCCCC
AAAAAGGGGAGAGTGAGAGACAAGGCAAAGAACATTCTTAAACATGCTGGTAAGTCTGTT
GGTGGTGGCATAAAGAAAGTGGTGTCGCGGAAGTCATCAGGAAAATCTAAAGGGGAGCTA
GAATCATCAGAGACAGAGAGAGTGAGCTCCCTTGAATCTGATTCTTCTGATGCAGAGTCT
CAACCTTCATCAATTGATTCACCTCGAGTTGTAGCACCTTCAGTTGGCAACACTTCCTTA
GCCAGCTCTGGTATTGAGAGTTTTGACACCACAATAAAGACCAGTGGACCAGTAGAGAGG
GAAAGCATTAAAGCTCCAGATGAGGTAGCAGGGAACGCAAAAGACAATCATGCCTTTGGT
CAGACTTCAAGTTTCAAAAGTTCGAGTTAG

Peptide Sequence

PEP ID

XP_016446264.1
PEP Infomation

PREDICTED: C2 domain-containing protein At1g53590-like isoform X2 [Nicotiana tabacum]
Sequence

MEEIVSQKILLPIIPWFMQKYKPWTAKEAAIQHLYLGRNPPMFTEMRVLRESTGDDHLVL
ELGMNFRTADDMSAILAVKLRKRLGFGMWAKLHLLGMHVEGKVLVGVKFLRKWPFISRLR
VCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWMDKLLAVAFEQTLVEPNMLVVDVEKFVS
PQPENWFSVDAKEPIAFVILEVLEAADMKPSDLNGFADPYVKGRLGPYRFRTKTRKKTLT
PQWNEEFKIPVCTWESPNNMLNVEVRDKDHFIDDTLGDCSINICDFRDGQRRDMWLSLQN
IKMGRLHLAITVVDCSKKRAEQSYERGSVDDEQDIKSAEMDTTEQSSLTTESADKSSKAG
DKYEPINIEGQQETGIWVHHPGSEVAQVWEPRKGKSRVDGEVLGVSGDSKGSFKSTAGGS
PHNDECRSDGSVNGSKPDSPSRIHRGLHKISSLFHRSPRHEDKSGNLGEPETSQHENLRA
VSAKEIGVKIIVDDTVSLSSLVTTPTEDGKESHEGNGERPKKGRVRDKAKNILKHAGKSV
GGGIKKVVSRKSSGKSKGELESSETERVSSLESDSSDAESQPSSIDSPRVVAPSVGNTSL
ASSGIESFDTTIKTSGPVERESIKAPDEVAGNAKDNHAFGQTSSFKSSS

Transcript Sequence

Gene sequence data has not been registered.